Information for 2-CTCAGTGDHTCHTDAD (Motif 3)

A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
Reverse Opposite:
G C T A G C A T G T A C G T C A C T A G C T A G T G C A C G T A G A C T A T G C C G T A A G T C A C G T A T C G C G T A A C T G
p-value:1e-9
log p-value:-2.128e+01
Information Content per bp:1.647
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets34.0 +/- 31.1bp
Average Position of motif in Background43.4 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCAGTGDHTCHTDAD
TTRAGTGSYK------
 A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGTGDHTCHTDAD
CTTGAGTGGCT------
 A C G T A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCAGTGDHTCHTDAD
CACAGN----------
 A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCAGTGDHTCHTDAD
TTAAGTGCTT------
 A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCAGTGDHTCHTDAD
TTGAGTGSTT------
 A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGTGDHTCHTDAD
TGCTGAGTCATNNTG---
 A C G T A C G T A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G A C G T A C G T A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCAGTGDHTCHTDAD
NTGCTGAGTCATCCN----
 A C G T A C G T A C G T A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTCAGTGDHTCHTDAD
HTGCTGAGTCAT-------
 A C G T A C G T A C G T A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGTGDHTCHTDAD
TGCCCAGNHW--------
 A C G T A C G T A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTCAGTGDHTCHTDAD
-TCAGTCTT-------
 A G T C C G A T A T G C C G T A C T A G C G A T T A C G C T A G G C A T A C G T G A T C G A T C A C G T C A T G C G T A C A G T
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T