Information for 2-SGGCCGGTCT (Motif 3)

A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T
Reverse Opposite:
G C T A T C A G C G T A T A G C A G T C T C A G A T C G T A G C G A T C T A G C
p-value:1e-13
log p-value:-3.020e+01
Information Content per bp:1.463
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif7.38%
Number of Background Sequences with motif1265.8
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets48.2 +/- 25.4bp
Average Position of motif in Background50.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0025.1_Glis2_1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---SGGCCGGTCT---
NTNTGGGGGGTCNNNA
 A C G T A C G T A C G T A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--SGGCCGGTCT
CGTGGGTGGTCC
 A C G T A C G T A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---SGGCCGGTCT----
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---SGGCCGGTCT-
AGGGGGCGGGGCTG
 A C G T A C G T A C G T A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------SGGCCGGTCT
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--SGGCCGGTCT
CTAGGCCT----
 A C G T A C G T A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:SGGCCGGTCT
--GGCVGTTR
 A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----SGGCCGGTCT--
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----SGGCCGGTCT-
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A C G T A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

GLIS1/MA0735.1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------SGGCCGGTCT
GCTTCGTGGGGGGTCT
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G A T C G T A G C A G T C T C A G A T C G G C A T A G T C C G A T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T