Information for 11-CACACACGCG (Motif 20)

A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G
Reverse Opposite:
A T G C T C A G A T G C C T A G A G C T A C T G A C G T T A C G C G A T A C T G
p-value:1e-7
log p-value:-1.659e+01
Information Content per bp:1.639
Number of Target Sequences with motif140.0
Percentage of Target Sequences with motif14.75%
Number of Background Sequences with motif4431.8
Percentage of Background Sequences with motif9.35%
Average Position of motif in Targets52.3 +/- 27.2bp
Average Position of motif in Background50.3 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.84
Offset:-5
Orientation:forward strand
Alignment:-----CACACACGCG-
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CACACACGCG
CRCCCACGCA
 A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CACACACGCG
GGACACACCCCC-
 A C G T A C G T A C G T A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CACACACGCG
YCCGCCCACGCN
 A C G T A C G T A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACACACGCG
CACGCA----
 A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CACACACGCG
CCAGACRSVB-
 A C G T A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CACACACGCG--
--GGCACGCGTC
 A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G A C G T A C G T
A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CACACACGCG
GGCCACACCCAN-
 A C G T A C G T A C G T A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CACACACGCG
GGACCACCCACG--
 A C G T A C G T A C G T A C G T A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACACACGCG
GGCCACACCCA--
 A C G T A C G T A C G T A G T C G C T A A T G C T G C A A G T C T C G A G A T C T A C G A G T C T A C G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T