Information for 5-CTCTTCGCATTAA (Motif 7)

A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C T G A C G A T C T A G A G T C A C T G C T G A G T C A A C T G C G T A A C T G
p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.926
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.6 +/- 17.2bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CTCTTCGCATTAA-
--------ATTAAA
 A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTCTTCGCATTAA
-----CGGATTAN
 A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTCTTCGCATTAA
-----NGGATTAA
 A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTCTTCGCATTAA-
------YCATTAMC
 A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTCTTCGCATTAA-
----GNGGATTAGN
 A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

GSX2/MA0893.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCTTCGCATTAA-
----ACTAATTAAA
 A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A

NKX6-2/MA0675.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTCTTCGCATTAA
-----CTAATTAA
 A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTCTTCGCATTAA
-GCTTCC------
 A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTCTTCGCATTAA
---AGCTCATTAT
 A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A
A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTCTTCGCATTAA--
TCCGTCGCTTAAAAG
 A G T C A C G T A G T C A C G T A G C T A G T C A C T G A G T C C G T A A G C T A C G T C G T A C G T A A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G