Information for 10-CCCGCTGTCC (Motif 18)

A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C
Reverse Opposite:
A T C G C T A G T G C A A G T C C T G A A T C G A T G C A C T G A C T G A T C G
p-value:1e-7
log p-value:-1.635e+01
Information Content per bp:1.827
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif197.0
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets45.3 +/- 29.3bp
Average Position of motif in Background51.3 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12/MA0521.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCTGTCC
NNGCAGCTGTT-
 A C G T A C G T A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCCGCTGTCC
CCTGCTGAGH
 A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCGCTGTCC
NNGCAGCTGTC-
 A C G T A C G T A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCCGCTGTCC
CCAGCTGTTN
 A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCCGCTGTCC
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCCGCTGTCC
-CAGCTGTT-
 A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCCGCTGTCC--
TGCAGCTGTCCCT
 A C G T A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCTGTCC--
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCGCTGTCC
CCCCCTGCTGTG-
 A C G T A C G T A C G T A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCCGCTGTCC
---GCTGTG-
 A T G C G T A C T G A C A T C G A T G C A G C T T C A G A C G T A G T C A T G C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T