Information for 3-TGGCAGCTGC (Motif 10)

C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C
Reverse Opposite:
T C A G G T A C G T C A A T C G A G T C G A C T A C T G G A T C A G T C G C T A
p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.726
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif531.3
Percentage of Background Sequences with motif1.67%
Average Position of motif in Targets53.0 +/- 27.9bp
Average Position of motif in Background48.9 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:TGGCAGCTGC--
-GACAGCTGCAG
 C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TGGCAGCTGC---
-AGCAGCTGCTNN
 C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCTGC-
NGNGACAGCTGCN
 A C G T A C G T C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCTGC-
-AGCAGCTGCT
 C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C A C G T
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TGGCAGCTGC--
-AACAGCTGCAG
 C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:TGGCAGCTGC--
--GCAGCTGTNN
 C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCTGC-
-CGCAGCTGCG
 C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.79
Offset:2
Orientation:forward strand
Alignment:TGGCAGCTGC--
--NCAGCTGCTG
 C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGCTGC----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGCTGC-
NNVVCAGCTGBN
 A C G T C G A T A C T G C T A G G T A C C T G A A C T G T A G C A C G T A C T G A G T C A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T