Information for 14-AGAAGAATATAAT (Motif 24)

C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A G T C A C G T
p-value:1e-5
log p-value:-1.288e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif9.52%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.5 +/- 1.5bp
Average Position of motif in Background48.9 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGAAGAATATAAT----
-NANTATTATAATTNNN
 C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGAAGAATATAAT----
-TAAGATTATAATACGG
 C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGAAGAATATAAT
TTAAGAACAATAAATT
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGAAGAATATAAT
TTTAGAACAATAAAAT
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGAAGAATATAAT
--AAGGATATNTN
 C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAAGAATATAAT----
-NNTAATTATAATTNNN
 C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGAAGAATATAAT-
TNNAGAACAATANATNN
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGAAGAATATAAT-
TAGTGAACAATAGATTT
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAAGAATATAAT----
-TTTAATTATAATTAAG
 C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGAATATAAT
NNTNANAACAATTNNA-
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T