Information for 11-ACTCWACCWGCCC (Motif 21)

G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C
Reverse Opposite:
A T C G C T A G A T C G T A G C G C T A C A T G A C T G A C G T G C A T A T C G C T G A C A T G C G A T
p-value:1e-5
log p-value:-1.360e+01
Information Content per bp:1.638
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif23.81%
Number of Background Sequences with motif421.7
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets47.7 +/- 27.9bp
Average Position of motif in Background50.7 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACTCWACCWGCCC
-SNGCACCTGCHS
 G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACTCWACCWGCCC
SSAATCCACANN---
 A C G T A C G T G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ACTCWACCWGCCC
AGCCACTCAAG------
 A C G T A C G T A C G T A C G T G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ACTCWACCWGCCC
NSCACTYVAV------
 A C G T A C G T A C G T G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ACTCWACCWGCCC
TCCAATCCACA-----
 A C G T A C G T A C G T G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---ACTCWACCWGCCC
RSCACTYRAG------
 A C G T A C G T A C G T G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----ACTCWACCWGCCC
MRSCACTYAA-------
 A C G T A C G T A C G T A C G T G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:ACTCWACCWGCCC
-ATCCAC------
 G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:ACTCWACCWGCCC
---NCACCTGTN-
 G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C
A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--ACTCWACCWGCCC-
ACATGCTACCTAATAC
 A C G T A C G T G C T A G T A C A G C T A T G C C G T A G T C A G T A C G A T C C G A T A T C G A T G C A G T C A T G C A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C