Information for 13-ACTYGBGYCAGYTCCA (Motif 20)

G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
Reverse Opposite:
A C G T A C T G C T A G T C G A T C G A A G T C A C G T C A T G C T G A A G T C T C G A G A T C C T A G C G T A C T A G C G A T
p-value:1e-6
log p-value:-1.415e+01
Information Content per bp:1.555
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1188.7
Percentage of Background Sequences with motif2.62%
Average Position of motif in Targets65.3 +/- 21.4bp
Average Position of motif in Background49.0 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ACTYGBGYCAGYTCCA
-----TGTCANYT---
 G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ACTYGBGYCAGYTCCA
---VBTGWCAGCB---
 G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:ACTYGBGYCAGYTCCA
-----TGGCAGTTGN-
 G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.52
Offset:7
Orientation:forward strand
Alignment:ACTYGBGYCAGYTCCA
-------TCAGTCTT-
 G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:ACTYGBGYCAGYTCCA
----AGGTCA------
 G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACTYGBGYCAGYTCCA
AGAGCGGGGTCAAGTA--
 A C G T A C G T G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:ACTYGBGYCAGYTCCA
--TRAGGTCA------
 G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACTYGBGYCAGYTCCA
CGCGCCGGGTCACGTA--
 A C G T A C G T G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:ACTYGBGYCAGYTCCA
------TKCTGTTCCA
 G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:ACTYGBGYCAGYTCCA
------GCCACACCCA
 G C T A A G T C G C A T G A T C C T A G A C G T C T A G G A C T G A T C G T C A A C T G A G C T A G C T A G T C T A G C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A