Information for 11-GGCAGGCAGDVAGAAA (Motif 15)

C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A
Reverse Opposite:
A G C T A C G T A G C T A G T C A C G T A T C G G A T C G T A C A G C T C T A G A G T C A G T C C G A T A C T G A T G C A G T C
p-value:1e-6
log p-value:-1.584e+01
Information Content per bp:1.737
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif19.05%
Number of Background Sequences with motif99.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets47.6 +/- 24.1bp
Average Position of motif in Background56.1 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCAGGCAGDVAGAAA--
GGAAGGAAGGAAGGAAGG
 C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGGCAGDVAGAAA
TGGCAGNCTGCCAG---
 A C G T C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGCAGGCAGDVAGAAA
--CWGGCGGGAA----
 C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGCAGGCAGDVAGAAA---
-WNAGTCADAVTGAAACTN
 C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A A C G T A C G T A C G T
A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGCAGGCAGDVAGAAA-
--BAGTCATANTGAAAG
 C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A A C G T
A C G T A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCAGGCAGDVAGAAA
GGTTGGCAT-------
 C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGGCAGDVAGAAA
NGTAGGTTGGCATNNN----
 A C G T A C G T A C G T A C G T C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGCAGGCAGDVAGAAA
-VCAGGTRDRY-----
 C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGGCAGDVAGAAA
NAGANTGGCGGGGNGNA-
 A C G T A C G T C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GGCAGGCAGDVAGAAA-
----AGGTGNCAGACAG
 C T A G A T C G G T A C G C T A A C T G A C T G A G T C C T G A A C T G C A T G T A G C C G T A A C T G C T G A G T C A C T G A A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G