Information for 3-GAAGTCATTATCC (Motif 3)

A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C
Reverse Opposite:
C A T G T A C G C G T A A G C T C T G A C T G A A C G T A T C G C G T A A G T C G A C T A C G T A G T C
p-value:1e-14
log p-value:-3.279e+01
Information Content per bp:1.814
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.4 +/- 21.5bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEOX2/MA0706.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAAGTCATTATCC
--AGTAATTAAC-
 A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C
A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAAGTCATTATCC---
-TAGTGATCATCATTA
 A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C A C G T A C G T A C G T
A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PH0020.1_Dlx1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAAGTCATTATCC
CTGAGGTAATTAAT-
 A C G T A C G T A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C
A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAAGTCATTATCC
--GGTAATTAGC-
 A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C
A C G T A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAAGTCATTATCC
AGGGAAGTCATTTCT-
 A C G T A C G T A C G T A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAGTCATTATCC--
GGAGGTCATTAATTAT
 A C G T A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAAGTCATTATCC
---GTCATN----
 A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C
A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAAGTCATTATCC
--GCTAATTAAC-
 A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C
A C G T A C G T T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAAGTCATTATCC
-AGCTCATTAT--
 A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAAGTCATTATCC
--GGTAATTAGC-
 A C T G G T C A C G T A A C T G A C G T A T G C C G T A A G C T A G C T C T G A A C G T A G T C G A T C
A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T