Information for 2-GAGCTGGAGAGGG (Motif 2)

A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G
Reverse Opposite:
G T A C A G T C A G T C A C G T A G T C A C G T A G T C A G T C C G T A A C T G A G T C A G C T A G T C
p-value:1e-14
log p-value:-3.279e+01
Information Content per bp:1.868
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 31.3bp
Average Position of motif in Background49.4 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAGCTGGAGAGGG
---BTBRAGTGSN
 A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAGCTGGAGAGGG-
---CTTGAGTGGCT
 A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAGCTGGAGAGGG
---CTYRAGTGSY
 A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAGCTGGAGAGGG-
----TTGAGTGSTT
 A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGCTGGAGAGGG-
GGGGCTYGKCTGGGA
 A C G T A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGCTGGAGAGGG-----
--TGCGGAGTGGGACTGG
 A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGCTGGAGAGGG--
NNNACCGAGAGTNNN
 A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GAGCTGGAGAGGG---
----TGGGGAAGGGCM
 A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GAGCTGGAGAGGG-----
--NATNGGGNGGGGANAN
 A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAGCTGGAGAGGG
GGGCGGGAAGG--
 A C T G T C G A C T A G A G T C A C G T T A C G A C T G C G T A A C T G C G T A A C T G A C T G A C T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T