Information for 2-KCAGTGGWTA (Motif 18)

A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A
Reverse Opposite:
A C G T C T G A C G A T A G T C A G T C C G T A A G T C A C G T A C T G G T A C
p-value:1e-8
log p-value:-2.038e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.3 +/- 23.3bp
Average Position of motif in Background54.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:KCAGTGGWTA
---GTGGAT-
 A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:KCAGTGGWTA
GCTGTGGTTT
 A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----KCAGTGGWTA--
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------KCAGTGGWTA-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:KCAGTGGWTA-
-CTGTGGTTTN
 A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KCAGTGGWTA
NNTGTGGTTT
 A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-KCAGTGGWTA
GTCTGTGGTTT
 A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KCAGTGGWTA--
TGATTGGCTANN
 A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----KCAGTGGWTA--
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-KCAGTGGWTA
TTRAGTGSYK-
 A C G T A C T G A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G C T C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T