Information for 4-AAGCAAGGCCTTG (Motif 6)

G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C G T C A G T C A A C T G A C T G G T A C A G T C A G C T A C G T A T C G A G T C A G C T A C G T
p-value:1e-7
log p-value:-1.682e+01
Information Content per bp:1.785
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets79.3 +/- 16.6bp
Average Position of motif in Background42.0 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:5
Orientation:forward strand
Alignment:AAGCAAGGCCTTG
-----AGGCCTNG
 G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:AAGCAAGGCCTTG
-----AGGCCTAG
 G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAGCAAGGCCTTG
---CAAGGHCANV
 G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AAGCAAGGCCTTG--
-----TGACCTTGAN
 G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAGCAAGGCCTTG-----
----CAGGCCNNGGCCNN
 G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AAGCAAGGCCTTG--
-----TGACCTTGAV
 G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGCAAGGCCTTG---
-AGAAATGACTTCCCT
 G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAGCAAGGCCTTG-----
---GCTGACCTTGAACTN
 G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGCAAGGCCTTG---
ACTCCAAGTACTTGGAA
 A C G T G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAGCAAGGCCTTG---
TATTCAAGGTCATGCGA
 A C G T G T C A C T G A C T A G T A G C C G T A C T G A A C T G A C T G G T A C A G T C A C G T A C G T A C T G A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A