Information for 3-AGAGAAGAGAGGGGVG (Motif 3)

C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G
Reverse Opposite:
G T A C A G T C T A G C A G T C A T G C G T A C C A G T A T G C A G C T A G T C A G C T C G A T A T G C A G C T A G T C A C G T
p-value:1e-10
log p-value:-2.326e+01
Information Content per bp:1.759
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.89%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.2 +/- 23.8bp
Average Position of motif in Background66.3 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3/MA0037.2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAGAAGAGAGGGGVG
AGATAAGA--------
 C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGAGAAGAGAGGGGVG
GGAGAAAGGTGCGA--
 C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGAGAAGAGAGGGGVG
AAACAGACAAAGGAAT----
 A C G T A C G T A C G T A C G T C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAGAGAGGGGVG
ANAGATAAGAA-------
 A C G T A C G T C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAAGAGAGGGGVG
NNGAGATAAGA--------
 A C G T A C G T A C G T C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGAGAAGAGAGGGGVG--
--NATNGGGNGGGGANAN
 C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G A C G T A C G T
A C G T A C G T C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

PB0021.1_Gata3_1/Jaspar

Match Rank:7
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------AGAGAAGAGAGGGGVG
TTTTTAGAGATAAGAAATAAAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAAGAGAGGGGVG
NAGATAAGNN-------
 A C G T C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAGAGAGGGGVG
NVAGATAAGR--------
 A C G T A C G T C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGAGAAGAGAGGGGVG
AAGATAAGATAACA---
 A C G T C G T A A C T G C T G A A T C G C G T A C T G A C T A G C T G A A T C G G T C A C A T G A T C G A C T G A T C G T A C G A C T G
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T A C G T A C G T