Information for 1-CTCAGVGAAHAGGVCC (Motif 1)

A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
Reverse Opposite:
A T C G A C T G A C T G T A G C A G T C G C A T C T A G A G C T C G A T G T A C A T C G A T G C C G A T T C A G C G T A A C T G
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.668
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.89%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 19.7bp
Average Position of motif in Background39.4 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGVGAAHAGGVCC
TCCCCTGGGGAC------
 A C G T A C G T A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGVGAAHAGGVCC
GCCTCAGGGCAT------
 A C G T A C G T A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CTCAGVGAAHAGGVCC
TTCTTGGAAAN-----
 A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTCAGVGAAHAGGVCC
-CSTGGGAAAD-----
 A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTCAGVGAAHAGGVCC
--CCAGGAACAG----
 A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CTCAGVGAAHAGGVCC
----TGGAACAGMA--
 A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:7
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------CTCAGVGAAHAGGVCC
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGVGAAHAGGVCC
TTTCTNAGAAAN-----
 A C G T A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CTCAGVGAAHAGGVCC
SCCTSAGGSCAW------
 A C G T A C G T A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.46
Offset:-6
Orientation:forward strand
Alignment:------CTCAGVGAAHAGGVCC
SMCAGTCWGAKGGAGGAGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A G T C C G T A T A C G T A G C A C T G G C T A C T G A G A T C C G T A T C A G A T C G T G A C G T A C T A G C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T A C G T