Information for 24-TGTGCCAGCGGCTGTG (Motif 42)

A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A C T G A G T C A T G C A C T G G T A C C A G T C T A G C A T G A G T C C G T A A T G C C G T A
p-value:1e-7
log p-value:-1.702e+01
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 31.6bp
Average Position of motif in Background48.3 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGTGCCAGCGGCTGTG-
--GGCCYCCTGCTGDGH
 A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TGTGCCAGCGGCTGTG
-----CAGCAGCTGN-
 A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.58
Offset:10
Orientation:forward strand
Alignment:TGTGCCAGCGGCTGTG
----------GCTGTG
 A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGTGCCAGCGGCTGTG
--GACCCCCCGCTGTG
 A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G
A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGTGCCAGCGGCTGTG
ATTGCCTCAGGCAAT-
 A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGTGCCAGCGGCTGTG
----CCCCCTGCTGTG
 A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGTGCCAGCGGCTGTG
------CGCAGCTGCG
 A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGTGCCAGCGGCTGTG
-ATGCCAACC------
 A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGTGCCAGCGGCTGTG
----NNAGCAGCTGCT
 A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGTGCCAGCGGCTGTG
-----NNGCAGCTGTT
 A C G T A T C G A C G T A C T G G A T C A G T C G T C A A C T G A G T C A T C G C T A G A G T C A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T