Information for 7-AGGTGAGGGA (Motif 39)

T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A
Reverse Opposite:
G A C T G T A C G A T C G T A C G C A T A T G C G T C A A G T C G A T C A G C T
p-value:1e-8
log p-value:-1.919e+01
Information Content per bp:1.651
Number of Target Sequences with motif133.0
Percentage of Target Sequences with motif17.39%
Number of Background Sequences with motif5057.0
Percentage of Background Sequences with motif10.46%
Average Position of motif in Targets48.5 +/- 25.5bp
Average Position of motif in Background50.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGAGGGA
CAGGTGAGG--
 A C G T T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGGTGAGGGA
CAGGTAAGTAT
 A C G T T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGGTGAGGGA
-GGGGGGGG-
 T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A
A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGTGAGGGA--
AGGTCAAGGTCA
 T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A A C G T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGAGGGA
NNCAGGTGNN---
 A C G T A C G T A C G T T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGTGAGGGA
AGGTGTGA--
 T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGTGAGGGA
AGGTGTGA--
 T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGTGAGGGA--
AGGTCAAGGTCA
 T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A A C G T A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGTGAGGGA---
AGGTGNCAGACAG
 T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGTGAGGGA---
--GGGCGGGAAGG
 T C G A C T A G T C A G C A G T T A C G C G T A C A T G C T A G C A T G C T G A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G