Information for 13-CTYWWTTTSAAWGAKC (Motif 20)

A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C
Reverse Opposite:
A C T G G T A C A C G T A G T C C G A T A C G T A G C T A T G C C G T A C G T A C G T A C G T A C G A T C T G A C G T A C T A G
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 18.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CTYWWTTTSAAWGAKC
----ATTTGAATT---
 A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTYWWTTTSAAWGAKC
-----TTTGAAACCG-
 A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTYWWTTTSAAWGAKC--
---TAATTCAATGAAGTG
 A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTYWWTTTSAAWGAKC---
---ACTATGAATGAATGAT
 A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTYWWTTTSAAWGAKC
----ACATCAAAGG--
 A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTYWWTTTSAAWGAKC
BAGTCATANTGAAAG---
 A C G T A C G T A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CTYWWTTTSAAWGAKC-
-----TTTGATTGATGN
 A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CTYWWTTTSAAWGAKC
--AAATAAGAAAAAAC
 A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C
A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTYWWTTTSAAWGAKC--
-TATAGATCAAAGGAAAA
 A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C A C G T A C G T
A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CTYWWTTTSAAWGAKC
---ATTTTCCATT---
 A G T C A C G T A G C T C G T A C G A T A C G T A C G T A C G T A T C G C T G A C G T A C G T A C T A G C G T A A C T G A G T C
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T