Information for 1-RGDAGGTGGAMAA (Motif 1)

C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A
Reverse Opposite:
A C G T A C G T A C G T A G C T A G T C A G T C G T C A A G T C A G T C A C G T G A T C A G T C A G T C
p-value:1e-17
log p-value:-4.075e+01
Information Content per bp:1.806
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif17.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.7 +/- 22.9bp
Average Position of motif in Background54.5 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:RGDAGGTGGAMAA
-GGAGGGGGAA--
 C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RGDAGGTGGAMAA
SDGCAGGTGCNS--
 A C G T C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:RGDAGGTGGAMAA
------TGGAAAA
 C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:RGDAGGTGGAMAA
---AGGTGTGAAA
 C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:RGDAGGTGGAMAA-
----AATGGAAAAT
 C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RGDAGGTGGAMAA
ACAGGATGTGGT---
 A C G T A C G T C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:RGDAGGTGGAMAA
--AAGGTGTGAAA
 C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:RGDAGGTGGAMAA--
--AAGGTGTGAAAAT
 C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A A C G T A C G T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RGDAGGTGGAMAA---
GAAAAGGTGTGAAAATT
 A C G T C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:RGDAGGTGGAMAA-
----NATGGAAAAN
 C T A G A C T G C T A G C G T A A C T G A C T G A C G T A C T G A C T G C T G A G T C A G T C A T G C A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T