Information for 20-CAGAAGATAG (Motif 38)

A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T A G T C A C G T A C G T A G T C A C G T A C T G
p-value:1e-2
log p-value:-6.582e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background51.8 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGAAGATAG
CCAAAAATAG
 A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGAAGATAG--
AAGATAAGATAACA
 A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAGAAGATAG--
----AGATAASR
 A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGAAGATAG
-NGAAGC---
 A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGAAGATAG--
----AGATAAGA
 A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGAAGATAG--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGAAGATAG-
KCCAAAAATAGC
 A C G T A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGAAGATAG-
DCYAAAAATAGM
 A C G T A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAGAAGATAG--
----AGATAAGA
 A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGAAGATAG--
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A