Information for 5-CACAAACTAA (Motif 27)

A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.274e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets83.0 +/- 0.0bp
Average Position of motif in Background39.5 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CACAAACTAA-
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACAAACTAA
RGGGCACTAACY--
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACAAACTAA-
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CACAAACTAA---
-AGAAACGAAAGT
 A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

POL007.1_BREd/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACAAACTAA
NANANAC---
 A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T

PH0175.1_Vax2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACAAACTAA---
GTGCACTAATTAAGAC
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C

PH0108.1_Msx3/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACAAACTAA---
CAAAACCAATTAATTT
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CACAAACTAA
NWAACCACADNN---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CACAAACTAA
AAACCACAGAN---
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

PH0135.1_Phox2a/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACAAACTAA-----
NNACTAATTAATNNNN
 A C G T A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A G C T T C G A G A T C A G C T G T C A C G T A A G C T A C G T C T G A C T G A A G C T C A T G T G A C A G C T T C A G