Information for 10-GAGVAAGWAACTMACA (Motif 13)

C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A
Reverse Opposite:
G A C T A C T G A C G T A C G T T C G A T A C G A C G T G C A T C G A T A G T C G C A T A G C T A C G T A G T C G A C T G T A C
p-value:1e-6
log p-value:-1.401e+01
Information Content per bp:1.560
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif21.74%
Number of Background Sequences with motif256.7
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets20.2 +/- 6.3bp
Average Position of motif in Background48.3 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAGVAAGWAACTMACA
GGAAANTGAAACTNA--
 A C G T C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGVAAGWAACTMACA
CAAAATCGAAACTAA--
 A C G T C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGVAAGWAACTMACA------
-AAANNGAAAGTGAAAGTAAAN
 C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GAGVAAGWAACTMACA--
------GAAACTGAAACT
 C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAGVAAGWAACTMACA--
------GAAASYGAAASY
 C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAGVAAGWAACTMACA--
------GAAAGTGAAAGT
 C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAGVAAGWAACTMACA--
------GRAASTGAAAST
 C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GAGVAAGWAACTMACA--
------GAAAMTGAAACT
 C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF9/MA0653.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GAGVAAGWAACTMACA--
---AACGAAACCGAAACT
 C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAGVAAGWAACTMACA-
GGAAAGCGAAACCAAAAC
 A C G T C A T G C T G A C T A G T G A C C T G A C G T A C T A G C G T A C G T A T C G A A T G C A G C T T G C A G T C A T G A C C G T A A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C