Information for 21-CTCCGCTTTCAGT (Motif 24)

A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T
Reverse Opposite:
C G T A A G T C A C G T A C T G C G T A C G T A C G T A C T A G A T G C A C T G A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.766e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 16.0bp
Average Position of motif in Background56.7 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTCCGCTTTCAGT
---TGGTTTCAGT
 A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGCTTTCAGT-----
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGCTTTCAGT
GKMTCADRTTWC---
 A C G T A C G T A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTCCGCTTTCAGT---
----ACTTTCACTTTC
 A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTCCGCTTTCAGT---
----RSTTTCRSTTTC
 A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGCTTTCAGT---
NNNCAGCTGTCAATATN
 A C G T A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTCCGCTTTCAGT---
----ASTTTCASTTYC
 A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCTTTCAGT
GCTCCG--------
 A C G T A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTCCGCTTTCAGT----
--TCACTTTCACTTTCN
 A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTCCGCTTTCAGT---
----ACTTTCACTTTC
 A G T C A C G T A G T C G T A C A T C G A G T C A C G T A C G T A C G T A G T C C G T A A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C