Information for 1-CCTGGVTGGTCCAGGG (Motif 1)

A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G
Reverse Opposite:
A T G C A G T C G T A C C G A T A C T G A T C G C T G A A G T C A G T C C G T A A C G T A G T C G T A C G T C A A T C G A C T G
p-value:1e-11
log p-value:-2.717e+01
Information Content per bp:1.759
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.70%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 28.8bp
Average Position of motif in Background42.4 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCTGGVTGGTCCAGGG
CGTGGGTGGTCC----
 A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCTGGVTGGTCCAGGG-
--AAGGKGRCGCAGGCA
 A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G A C G T
A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

GLIS1/MA0735.1/Jaspar

Match Rank:3
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----CCTGGVTGGTCCAGGG
GCTTCGTGGGGGGTCT----
 A C G T A C G T A C G T A C G T A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T A C G T A C G T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:4
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGVTGGTCCAGGG
CTTCGTGGGGGGTC-----
 A C G T A C G T A C G T A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:CCTGGVTGGTCCAGGG
-----CTGTTCCTGG-
 A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CCTGGVTGGTCCAGGG
NGCGTGGGCGGR------
 A C G T A C G T A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGVTGGTCCAGGG
NTNTGGGGGGTCNNNA-
 A C G T A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.46
Offset:1
Orientation:forward strand
Alignment:CCTGGVTGGTCCAGGG
-MKGGGYGTGGCC---
 A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G
A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGVTGGTCCAGGG
NNANTGGTGGTCTTNNN
 A C G T A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--CCTGGVTGGTCCAGGG
TGCGTGGGYG--------
 A C G T A C G T A G T C A T G C A C G T A C T G A C T G T C G A C G A T A C T G C T A G A G C T A T G C A G T C C G T A A C T G A C T G A T C G
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T