Information for 5-CACACACACA (Motif 9)

A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A
Reverse Opposite:
A C G T T C A G G A C T C T A G A G C T C T A G A G C T T C A G A G C T T C A G
p-value:1e-2
log p-value:-6.020e+00
Information Content per bp:1.568
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif20.22%
Number of Background Sequences with motif4446.8
Percentage of Background Sequences with motif9.86%
Average Position of motif in Targets55.0 +/- 19.5bp
Average Position of motif in Background48.7 +/- 43.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CACACACACA
CRCCCACGCA
A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CACACACACA-
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CACACACACA
----CACGCA
A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CACACACACA
YCCGCCCACGCN
A C G T A C G T A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CACACACACA-----
CGAAGCACACAAAATA
A C G T A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CACACACACA-
-TBGCACGCAA
A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACACACACA
ACGCCCACGCA
A C G T A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACACACACA---
-GGACACACCCCC
A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A A C G T A C G T A C G T
A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

EGR4/MA0733.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACACACACA---
TTACGCCCACGCATTT
A C G T A C G T A C G T A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACACACACA---
TACATGTGCACATAAAA
A C G T A C G T A C G T A C G T A G T C T C G A A G T C T C G A A G T C C T G A A G T C C T G A A G T C T G C A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A