Information for 3-TACCACAGAC (Motif 8)

A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C
Reverse Opposite:
A C T G A C G T A T G C A G C T A C T G A C G T T A C G C T A G A C G T C T G A
p-value:1e-5
log p-value:-1.296e+01
Information Content per bp:1.818
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif7.87%
Number of Background Sequences with motif298.8
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets47.5 +/- 25.4bp
Average Position of motif in Background48.4 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TACCACAGAC----
----CCAGACRSVB
 A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TACCACAGAC
AAACCACAGAN
 A C G T A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TACCACAGAC
NWAACCACADNN
 A C G T A C G T A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TACCACAGAC--
----CCAGACAG
 A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TACCACAGAC
AAACCACAGC-
 A C G T A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TACCACAGAC--
----BCAGACWA
 A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TACCACAGAC
---CACAGN-
 A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TACCACAGAC------
CAAATCCAGACATCACA
 A C G T A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TACCACAGAC
NAAACCACAG--
 A C G T A C G T A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TACCACAGAC-
-ATGCCAGACN
 A G C T G T C A A G T C A T G C C G T A A G T C C T G A A T C G C G T A A G T C A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C