Information for 2-AGAAAGRAGG (Motif 7)

T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G
Reverse Opposite:
G A T C A G T C G C A T A G C T G T A C A G C T A G C T C A G T A G T C A G C T
p-value:1e-5
log p-value:-1.346e+01
Information Content per bp:1.660
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif25.84%
Number of Background Sequences with motif3902.0
Percentage of Background Sequences with motif8.65%
Average Position of motif in Targets46.0 +/- 26.6bp
Average Position of motif in Background49.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata1/MA0035.3/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGAAAGRAGG-
ANAGATAAGAA
 T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G A C G T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Gata4/MA0482.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAGRAGG
NNGAGATAAGA
 A C G T T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGAAAGRAGG--
GGAGAAAGGTGCGA
 A C G T A C G T T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0021.1_Gata3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGAAAGRAGG-------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAAAGRAGG-
-CAGATAAGGN
 T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G A C G T
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGAAAGRAGG-
-NAGATAAGNN
 T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G A C G T
A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGAAAGRAGG--------
GGAAGGAAGGAAGGAAGG
 T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGAAAGRAGG
NVAGATAAGR
 T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-9
Orientation:forward strand
Alignment:---------AGAAAGRAGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

GATA2/MA0036.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGAAAGRAGG----
NCAGATAAGAANNN
 T C G A C T A G G T C A C T G A T C G A C A T G T C G A C G T A C T A G C T A G A C G T A C G T A C G T A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T