Information for 5-CASAYACTRHCCACCW (Motif 6)

A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T
Reverse Opposite:
C G T A A C T G C T A G A C G T A C T G A C T G C A G T A G C T C G T A A C T G A C G T C T A G A C G T A T C G A C G T A C T G
p-value:1e-6
log p-value:-1.428e+01
Information Content per bp:1.781
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.3 +/- 26.4bp
Average Position of motif in Background47.9 +/- 48.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CASAYACTRHCCACCW
AGCGGCACACACGCAA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:2
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------CASAYACTRHCCACCW
NNCNNNCNCANACAATTAGNAC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CASAYACTRHCCACCW
CGAAGCACACAAAATA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------CASAYACTRHCCACCW
CAAATCCAGACATCACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CASAYACTRHCCACCW
GGCCACACCCAN-------
 A C G T A C G T A C G T A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.49
Offset:8
Orientation:forward strand
Alignment:CASAYACTRHCCACCW
--------ATCCAC--
 A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CASAYACTRHCCACCW
CCAGACRSVB-------
 A C G T A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:8
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CASAYACTRHCCACCW
GGYAGCAYDTGCTDCCCNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CASAYACTRHCCACCW
CCAGACAG---------
 A C G T A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CASAYACTRHCCACCW---
CCCCAAACCACCCCCCCCCA
 A C G T A G T C C G T A A T G C C G T A A G T C G T C A G T A C C G A T T C G A G T A C T A G C A G T C G T C A A G T C G T A C G C A T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C