Information for 3-TTTAGGDACTGGDGGA (Motif 4)

A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
Reverse Opposite:
A C G T G T A C A G T C G C T A G A T C G T A C C G T A A T C G A C G T G A C T A G T C G T A C C G A T C G T A C G T A G T C A
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.761
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.49%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 24.7bp
Average Position of motif in Background47.6 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTTAGGDACTGGDGGA
CTTTAAGTACTTAATG-
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGGDACTGGDGGA
NATTTAAGTACTTANNA-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGGDACTGGDGGA
NATTTAAGTACTTNAAA-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TTTAGGDACTGGDGGA
-AGAGGAAGTG-----
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:5
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGGDACTGGDGGA
AAGATCGGAANTNNNA--
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:TTTAGGDACTGGDGGA
-TTATGTAACAT----
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TTTAGGDACTGGDGGA
-TTATGCAAT------
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

TEF/MA0843.1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-TTTAGGDACTGGDGGA
NGTTACGTAATN-----
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A A C G T A C G T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---TTTAGGDACTGGDGGA
DGWTTTATGRCN-------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:TTTAGGDACTGGDGGA
----GGAAGTGAAAST
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C G T A A T G C A C G T A C T G C T A G C A G T C T A G A C T G C G T A
A C G T A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T