Information for 12-GTTTATTTTGAACCTG (Motif 25)

A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A G T C
p-value:1e-4
log p-value:-9.578e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GTTTATTTTGAACCTG
------TTTGAAACCG
 A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTTTATTTTGAACCTG
GNATTTTTTTTTTGANC---
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTTTATTTTGAACCTG
NNNNTTTTTTTTTNAAC---
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTTTATTTTGAACCTG
TGTTTATTT--------
 A C G T A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTTTATTTTGAACCTG
-TTAATGTTTAACC--
 A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTTTATTTTGAACCTG
TATTGTTTATT---------
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTTTATTTTGAACCTG
TTCTATTTTTAGNNN-
 A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GTTTATTTTGAACCTG
-----ATTTGAATT--
 A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTTTATTTTGAACCTG
CBTGTTTAYAWW-------
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTTTATTTTGAACCTG
-KCTATTTTTRGH---
 A C T G A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T A C G T A C G T