Information for 9-CCGGCTTCACTGTGCC (Motif 22)

A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C G T A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G
p-value:1e-4
log p-value:-9.578e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CCGGCTTCACTGTGCC---
---------CTGTTCCTGG
 A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCTTCACTGTGCC--
TTTMCGCTTSABTGAACACN
 A C G T A C G T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCGGCTTCACTGTGCC
GTCATGCHTGRCTGS---
 A C G T A C G T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCGGCTTCACTGTGCC
---GCTTCC-------
 A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCGGCTTCACTGTGCC---
-NAGTTTCABTHTGACTNW
 A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PAX5/MA0014.2/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCTTCACTGTGCC-
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTTCACTGTGCC
GTTTTGCTTTCACTTTCC-
 A C G T A C G T A C G T A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CCGGCTTCACTGTGCC
-YDGHTACAWTGTADC
 A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C
A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CCGGCTTCACTGTGCC
-TGGTTTCAGT-----
 A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.48
Offset:8
Orientation:forward strand
Alignment:CCGGCTTCACTGTGCC
--------GCTGTG--
 A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T