Information for 1-YTYRGTSYYWTWTMTK (Motif 1)

A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T
Reverse Opposite:
G T C A C G T A A C T G C G T A C G T A C G T A C G A T C T A G C T A G A T G C C G T A A G T C A G C T C T A G C G T A C T G A
p-value:1e-9
log p-value:-2.289e+01
Information Content per bp:1.769
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif42.86%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.3 +/- 33.8bp
Average Position of motif in Background25.8 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--YTYRGTSYYWTWTMTK
TNNNNGGTGTCATNTNT-
 A C G T A C G T A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:YTYRGTSYYWTWTMTK
-------TCTTATCT-
 A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:YTYRGTSYYWTWTMTK-
--NNNNNNCTTTTATAN
 A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:YTYRGTSYYWTWTMTK-
--NNNNNNCTTTTATAN
 A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:YTYRGTSYYWTWTMTK--
-------TCTTATCTCCC
 A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Gata1/MA0035.3/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:YTYRGTSYYWTWTMTK-
------TTCTTATCTGT
 A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:YTYRGTSYYWTWTMTK--
---------TTTTATTGC
 A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:YTYRGTSYYWTWTMTK-
-------YCTTATCTBN
 A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:YTYRGTSYYWTWTMTK
------NCCTTATCTG
 A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:YTYRGTSYYWTWTMTK--
--------NTTTTATGAC
 A G C T C G A T A G T C C T G A A C T G A C G T A T C G A G T C A G T C C G T A A C G T C G A T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C