p-value: | 1e-9 |
log p-value: | -2.121e+01 |
Information Content per bp: | 1.941 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.54% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 41.4 +/- 30.3bp |
Average Position of motif in Background | 55.1 +/- 24.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGATKAGGGTGCC GGATTAGC----- |
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GSC2/MA0891.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGATKAGGGTGCC GNGGATTAGN----- |
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GSC/MA0648.1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGATKAGGGTGCC NNGGATTAGN----- |
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PITX3/MA0714.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGATKAGGGTGCC GGGATTANN----- |
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GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGATKAGGGTGCC RGGATTAR------ |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGATKAGGGTGCC VRGGATTARN----- |
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Pitx1/MA0682.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGATKAGGGTGCC GGGATTAA------ |
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PB0185.1_Tcf1_2/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGATKAGGGTGCC TTGCCCGGATTAGG----- |
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Dmbx1/MA0883.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGATKAGGGTGCC TGAACCGGATTAATGAA-- |
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PH0025.1_Dmbx1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGATKAGGGTGCC TGAACCGGATTAATGAA-- |
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