Information for 6-RAAAGATTGR (Motif 16)

T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G
Reverse Opposite:
G A T C T G A C G T C A T C G A G A C T T A G C C A G T G A C T A G C T A G C T
p-value:1e-13
log p-value:-3.124e+01
Information Content per bp:1.461
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets52.1 +/- 22.5bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:RAAAGATTGR
--NNNANTGA
 T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.55
Offset:6
Orientation:forward strand
Alignment:RAAAGATTGR--
------TTGGCA
 T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RAAAGATTGR-----
---TGATTGGCTANN
 T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RAAAGATTGR
--AAGCTTG-
 T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--RAAAGATTGR-----
NAAANTTATTGAANCAN
 A C G T A C G T T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-RAAAGATTGR-----
NNANTGATTGATNTTN
 A C G T T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RAAAGATTGR
CNGTGATTTN
 T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-RAAAGATTGR-----
NNANTGATTGATNNNN
 A C G T T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:RAAAGATTGR----
-----NTTGGCANN
 T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:RAAAGATTGR-
-----ATTGTT
 T C G A T C G A C T G A G T C A A T C G C T G A A G C T C A G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T