Information for 5-MCCAGYGGCA (Motif 15)

G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C A T G C T C A G A T G C A G C T C T A G A T C G C A G T
p-value:1e-13
log p-value:-3.124e+01
Information Content per bp:1.796
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.5 +/- 21.7bp
Average Position of motif in Background45.8 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---MCCAGYGGCA--
ATTGCCTCAGGCAAT
 A C G T A C G T A C G T G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---MCCAGYGGCA-
CCGCCCAAGGGCAG
 A C G T A C G T A C G T G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---MCCAGYGGCA-
NTGCCCANNGGTNA
 A C G T A C G T A C G T G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---MCCAGYGGCA--
AGCAACAGCCGCACC
 A C G T A C G T A C G T G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--MCCAGYGGCA
TGCCCCAGGGCA
 A C G T A C G T G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--MCCAGYGGCA
TGCCCCCGGGCA
 A C G T A C G T G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--MCCAGYGGCA
TGCCCCAGGGCA
 A C G T A C G T G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--MCCAGYGGCA
NNVVCAGCTGBN
 A C G T A C G T G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-MCCAGYGGCA
NNVCAGCTGB-
 A C G T G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---MCCAGYGGCA----
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T G T C A A T G C A G T C C T G A A T C G A G T C A T C G A C T G A G T C C T G A A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A