Information for 1-TAGTTTRCAM (Motif 7)

A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G G A T C C G T A C T G A C G T A A G T C A C G T C G T A
p-value:1e-5
log p-value:-1.214e+01
Information Content per bp:1.842
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif12.12%
Number of Background Sequences with motif164.3
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets50.0 +/- 18.0bp
Average Position of motif in Background56.2 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TAGTTTRCAM-
TCGCGAAGGTTGTACT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TAGTTTRCAM--
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAGTTTRCAM
ACTAGTTAAC--
 A C G T A C G T A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TAGTTTRCAM---
---TTTGAAACCG
 A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Foxk1/MA0852.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAGTTTRCAM---
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAGTTTRCAM---
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0019.1_Foxl1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAGTTTRCAM---
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C A C G T A C G T A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

FOXO3/MA0157.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGTTTRCAM
TTGTTTAC--
 A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C
G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TAGTTTRCAM-
--ATTTGAATT
 A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGTTTRCAM
TTGTTTAC--
 A C G T C G T A C T A G C G A T A G C T A C G T C T A G G T A C C G T A G T A C
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T