Information for 2-CATAGTGCCCATC (Motif 3)

A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G A C T G A C T G A G T C C G T A A T G C A C G T C G T A A C G T A C T G
p-value:1e-6
log p-value:-1.527e+01
Information Content per bp:1.947
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif6.06%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 24.7bp
Average Position of motif in Background59.9 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CATAGTGCCCATC
----ATGCCCACC
 A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATAGTGCCCATC---
GGGTGTGCCCAAAAGG
 A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CATAGTGCCCATC--
CGAACAGTGCTCACTAT
 A C G T A C G T A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CATAGTGCCCATC
NAGGTCACNNTGACC---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CATAGTGCCCATC----
--TAGTGATCATCATTA
 A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CATAGTGCCCATC-
----TTCCCCCTAC
 A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CATAGTGCCCATC--
-----TGCCCAGNHW
 A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CATAGTGCCCATC---
CAGATGTGCACATACGT
 A C G T A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CATAGTGCCCATC
AGGNCANNGTGACCT--
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CATAGTGCCCATC
----ATGCCAACC
 A G T C C G T A A C G T C G T A A T C G A C G T C T A G G T A C A G T C A G T C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C