| p-value: | 1e-6 |
| log p-value: | -1.527e+01 |
| Information Content per bp: | 1.848 |
| Number of Target Sequences with motif | 2.0 |
| Percentage of Target Sequences with motif | 6.06% |
| Number of Background Sequences with motif | 0.6 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 27.0 +/- 12.0bp |
| Average Position of motif in Background | 89.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 1 |
| Score: | 0.67
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTGAYCTWACTMS
-TGACCTYA---- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 2 |
| Score: | 0.67
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTGAYCTWACTMS
-TGACCTARTT-- |
|
|
|
NR4A2/MA0160.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.65
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTGAYCTWACTMS
GTGACCTT----- |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.65
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTGAYCTWACTMS
-TGACCTTGAT-- |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.65
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTGAYCTWACTMS-
TTGACCTANTTATN |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 6 |
| Score: | 0.64
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTGAYCTWACTMS
-TGACCT------ |
|
|
|
PH0045.1_Hoxa1/Jaspar
| Match Rank: | 7 |
| Score: | 0.59
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CTGAYCTWACTMS---
CTGAGCTAATTACCGT |
|
|
|
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 8 |
| Score: | 0.58
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CTGAYCTWACTMS
NTGACCTTGA--- |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTGAYCTWACTMS
-TGACCYCT---- |
|
|
|
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 10 |
| Score: | 0.57
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTGAYCTWACTMS
CTGACCTTTG--- |
|
|
|
