Information for 12-RACCTTTTTT (Motif 19)

T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T
Reverse Opposite:
C T G A C G T A T C G A C G T A T G C A C T G A A T C G A T C G A C G T A G C T
p-value:1e-7
log p-value:-1.737e+01
Information Content per bp:1.648
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif7.51%
Number of Background Sequences with motif1702.5
Percentage of Background Sequences with motif3.49%
Average Position of motif in Targets49.3 +/- 27.4bp
Average Position of motif in Background50.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:RACCTTTTTT
--CCTTTGTT
 T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---RACCTTTTTT-
NNGCACCTTTCTCC
 A C G T A C G T A C G T T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:RACCTTTTTT--
--CCTTTGTTTT
 T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:RACCTTTTTT--
--YCTTTGTTCC
 T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:RACCTTTTTT
--CCWTTGTY
 T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--RACCTTTTTT-----
NNNTCCTTTGTTCTNNN
 A C G T A C G T T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--RACCTTTTTT-----
TNNTCCTTTGTTCTNNT
 A C G T A C G T T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----RACCTTTTTT-
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:RACCTTTTTT------
--TTTTTTTTCNNGTN
 T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-RACCTTTTTT-
TGACCTTTNCNT
 A C G T T C G A G T C A T A G C T A G C G A C T A C G T G C A T A G C T G C A T A G C T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T