Information for 4-GAATAGGCTTATA (Motif 5)

A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAATAGGCTTATA
-AAGAGGATTAG-
 A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A
A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

PH0126.1_Obox6/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAATAGGCTTATA-
AAAAACGGATTATTG
 A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAATAGGCTTATA
---NGGGATTA--
 A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAATAGGCTTATA---
TGAACCGGATTAATGAA
 A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAATAGGCTTATA---
TGAACCGGATTAATGAA
 A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

POU3F3/MA0788.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAATAGGCTTATA-
-ATTATGCTAATTT
 A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C G T
A C G T C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAATAGGCTTATA------
---TAAGATTATAATACGG
 A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAATAGGCTTATA
GTAATCDGATTA--
 A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAATAGGCTTATA
----NGGATTAN-
 A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A
A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAATAGGCTTATA
-AATATGCAAATT
 A C T G C G T A C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A A C G T C G T A
A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T