Information for 3-CAGCTTTCGCGGT (Motif 3)

A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T
Reverse Opposite:
C T G A G T A C A T G C A C T G G T A C A C T G C G T A C G T A C T G A A C T G A G T C A C G T A C T G
p-value:1e-13
log p-value:-3.220e+01
Information Content per bp:1.936
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 24.4bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTTCGCGGT
TGCAGCTGTCCCT--
 A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAGCTTTCGCGGT--
---TTTTCGCGCGAA
 A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTTTCGCGGT
NNGCAGCTGTT-----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGCTTTCGCGGT---
-AGTATTCTCGGTTGC
 A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGCTTTCGCGGT
CAGCTGTT-----
 A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTTTCGCGGT
NNGCAGCTGTC-----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGCTTTCGCGGT
CAACGTCCGCGG-
 A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTTCGCGGT
AGCAGCTGCTNN---
 A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTTTCGCGGT
ACAGCTGTTV----
 A C G T A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGCTTTCGCGGT---
-ACCACTCTCGGTCAC
 A G T C C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C T G A G T C A T C G A C T G A G C T A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C