Information for 10-CCGACCTGCTGTCCCT (Motif 15)

A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G C T A G C G T A A G T C C G T A A T C G A G T C C G T A A C T G A C T G A C G T A G T C C T A G A T C G
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.872
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 23.0bp
Average Position of motif in Background21.0 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:CCGACCTGCTGTCCCT--
--------CTGTTCCTGG
 A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCGACCTGCTGTCCCT
-CCCCCTGCTGTG---
 A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCGACCTGCTGTCCCT
-NNTCCTGCTGTGNNN
 A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCGACCTGCTGTCCCT
------TKCTGTTCCA
 A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCGACCTGCTGTCCCT
----CCTGCTGAGH--
 A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGACCTGCTGTCCCT
GGCCYCCTGCTGDGH--
 A C G T A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCGACCTGCTGTCCCT
---TGCAGCTGTCCCT
 A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Rarb/MA0857.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCGACCTGCTGTCCCT-
-TGACCTTTTGACCTTT
 A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T A C G T
A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCGACCTGCTGTCCCT
NAGNACANNNTGTNCT-
 A C G T A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCGACCTGCTGTCCCT
-TNTCCTGCTGTGNNG
 A T G C A G T C C T A G C G T A G T A C G T A C A C G T C T A G A T G C A C G T A C T G A C G T G A T C A G T C A G T C C G A T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G