Information for 2-CACGTGACTGACA (Motif 2)

A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T A G T C C G T A T C A G C G A T A G T C C G T A G A T C C T A G A C G T T A C G
p-value:1e-16
log p-value:-3.736e+01
Information Content per bp:1.801
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 26.5bp
Average Position of motif in Background33.1 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGACTGACA
NCACGTGACN----
 A C G T A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGACTGACA
ACCACGTGAC-----
 A C G T A C G T A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CACGTGACTGACA
ATCACGTGAC-----
 A C G T A C G T A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CACGTGACTGACA
CACGTGDC-----
 A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A
G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CACGTGACTGACA
GCCACGTGACC----
 A C G T A C G T A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:6
Score:0.74
Offset:-8
Orientation:forward strand
Alignment:--------CACGTGACTGACA-
GGAAGAGTCACGTGACCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A A C G T
C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CACGTGACTGACA
ATCACGTGAC-----
 A C G T A C G T A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CACGTGACTGACA
CACGTGNC-----
 A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A
G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CACGTGACTGACA
KCCACGTGAC-----
 A C G T A C G T A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGACTGACA
TCACGTGACC----
 A C G T A T G C C G T A G A T C C T A G A C G T A C T G C G T A A G T C G C A T C T A G C G T A A G T C C G T A
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T A C G T A C G T A C G T