Information for 12-HACACATACTAABBAT (Motif 17)

G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
Reverse Opposite:
C T G A A G C T T A C G T A G C C G A T A C G T G T C A A T C G A C G T C T G A A C G T A T C G A C G T A C T G A G C T C T G A
p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.776
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 22.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---HACACATACTAABBAT
AGCGGCACACACGCAA---
 A C G T A C G T A C G T G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---HACACATACTAABBAT
CGAAGCACACAAAATA---
 A C G T A C G T A C G T G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------HACACATACTAABBAT
CAGATGTGCACATACGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------HACACATACTAABBAT
TACATGTGCACATAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---HACACATACTAABBAT
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---HACACATACTAABBAT
TCCATCCCATAATACTC--
 A C G T A C G T A C G T G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:HACACATACTAABBAT
--CACATTCCAT----
 G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:HACACATACTAABBAT
-GCACGTAY-------
 G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-HACACATACTAABBAT
GATAACATCCTAGTAG-
 A C G T G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---HACACATACTAABBAT
NWAACCACADNN-------
 A C G T A C G T A C G T G A C T C T G A A G T C C G T A A T G C C G T A A G C T C G T A T A G C A C G T C G T A C G T A A T C G A G T C C T G A A G C T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T