Information for 4-TCADTTAGTATTA (Motif 8)

A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A
Reverse Opposite:
C G A T C T G A C G T A C G A T C G T A A T G C A G C T C G T A C G T A G A C T A C G T A T C G C G T A
p-value:1e-7
log p-value:-1.657e+01
Information Content per bp:1.806
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif180.8
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets52.8 +/- 26.6bp
Average Position of motif in Background52.7 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCADTTAGTATTA----
TNNTTTCGTATTNNANN
 A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

POU4F2/MA0683.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCADTTAGTATTA--
CTCATTAATTATGCAT
 A C G T A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A A C G T A C G T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCADTTAGTATTA
GAAGATCAATCACTAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCADTTAGTATTA
NNNTTAATTGGTTTTN
 A C G T A C G T A C G T A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCADTTAGTATTA
GAAGATCAATCACTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCADTTAGTATTA--
CTCATTAATTATGCAT
 A C G T A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A A C G T A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCADTTAGTATTA--
GCTAATTATAATTATC
 A C G T A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCADTTAGTATTA-
NNTNNCAATATTAG
 A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCADTTAGTATTA-
NNTNNCAATATTAG
 A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCADTTAGTATTA---
--AAAAACCATTAAGG
 A C G T A T G C C G T A C T G A A C G T G C A T C T G A A T C G A C G T C G T A C G A T A G C T C G T A A C G T A C G T A C G T
A C G T A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G