Information for 3-GCCACATTTTGGVTGC (Motif 4)

A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C
Reverse Opposite:
A C T G A G T C C G T A A T C G G A T C G T A C G T C A G T C A C G T A C G T A C G A T A T C G A C G T T A C G T A C G T A G C
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.693
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 22.0bp
Average Position of motif in Background48.7 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GCCACATTTTGGVTGC----
----NNNNTTGTGTGCTTNN
 A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GCCACATTTTGGVTGC
TGTTCCCATTGTGTACT-
 A C G T A C G T A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.47
Offset:4
Orientation:forward strand
Alignment:GCCACATTTTGGVTGC-----
----GATATTGACAGCTGCGT
 A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.46
Offset:-5
Orientation:forward strand
Alignment:-----GCCACATTTTGGVTGC
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:GCCACATTTTGGVTGC--
---WCATTTTGKCCTCYT
 A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C A C G T A C G T
A C G T A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:6
Score:0.46
Offset:1
Orientation:forward strand
Alignment:GCCACATTTTGGVTGC
-CCATATATGGNA---
 A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:7
Score:0.46
Offset:-7
Orientation:forward strand
Alignment:-------GCCACATTTTGGVTGC
ATGCCACGCCCCTTTTTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.45
Offset:-4
Orientation:reverse strand
Alignment:----GCCACATTTTGGVTGC
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.45
Offset:-7
Orientation:forward strand
Alignment:-------GCCACATTTTGGVTGC
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.45
Offset:1
Orientation:forward strand
Alignment:GCCACATTTTGGVTGC
-CCATATATGG-----
 A T C G A T G C A G T C G T C A A T G C C G T A G C A T C G A T A C G T A C G T A C T G C T A G T A C G C G A T C T A G G T A C
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T A C G T A C G T