Information for 14-TTTATCCTTAATCTCA (Motif 37)

A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G C G T A A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.418e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TTTATCCTTAATCTCA
-------YTAATCCY-
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTATCCTTAATCTCA
TTAATGTTTAACC---
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTATCCTTAATCTCA
NGTTAATNATTAACN---
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TTTATCCTTAATCTCA
------CTTAATCCC-
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TTTATCCTTAATCTCA
-------TTAATCCC-
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TTTATCCTTAATCTCA
-------TTAATCCT-
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTTATCCTTAATCTCA
GTTAATGATTAAC----
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTTATCCTTAATCTCA
AAGATATCCTT-------
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TTTATCCTTAATCTCA
------CCTAATCCGC
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TTTATCCTTAATCTCA
------NYTAATCCYB
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T