Information for 23-GCCTGTATTCAAT (Motif 32)

A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.418e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCCTGTATTCAAT-----
--NNNTATTGAATTGNNN
 A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCTGTATTCAAT--
GGACTGAATTCATGCC
 A C G T A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCCTGTATTCAAT--
-----TAATCAATTA
 A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

PH0038.1_Hlx/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCCTGTATTCAAT-----
---TGTAATTAATTATGG
 A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G

Foxo1/MA0480.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCTGTATTCAAT
TCCTGTTTACA--
 A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCCTGTATTCAAT
---HNRAATCAAT
 A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

CUX1/MA0754.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCCTGTATTCAAT--
-----TAATCGATAA
 A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCCTGTATTCAAT--
ATTTGCATACAATGG
 A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCCTGTATTCAAT
SCHTGTTTACAT-
 A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGTATTCAAT-
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T C G T A A C G T A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G