Information for 1-THAGGTATDGAGC (Motif 3)

A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C
Reverse Opposite:
C A T G G A T C A C G T A G T C G C T A C G T A A G C T C G T A A G T C A G T C A C G T C G T A C G T A
p-value:1e-9
log p-value:-2.267e+01
Information Content per bp:1.823
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif39.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets33.5 +/- 19.7bp
Average Position of motif in Background50.6 +/- 39.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:THAGGTATDGAGC
-CAGGTAAGTAT-
 A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:THAGGTATDGAGC
VCAGGTRDRY---
 A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:THAGGTATDGAGC
TTATGTAACAT--
 A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C
C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:THAGGTATDGAGC
-CAGGTGAGG---
 A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T

TEF/MA0843.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--THAGGTATDGAGC
NGTTACGTAATN---
 A C G T A C G T A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C
A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A A C G T A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-THAGGTATDGAGC--
NTNAGGTAATTACCTT
 A C G T A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:THAGGTATDGAGC--------
-AANGTGAAGNANNGTNAAGG
 A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C T A G A C T G A C G T C T A G T C G A T C G A C T A G C G T A C T G A T C A G C T A G C T A G C G A T C G T A C G T A C T G A T C A G C T A G

HLF/MA0043.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--THAGGTATDGAGC
NGTTACGTAANN---
 A C G T A C G T A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C
C A T G T C A G G C A T C A G T C T G A A G T C T C A G G A C T T G C A C G T A A G C T C T A G A C G T A C G T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-THAGGTATDGAGC--
NTGAGCTAATTACCNT
 A C G T A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C A C G T A C G T
G C T A G C A T C A T G C T G A C T A G A T G C G A C T T G C A G T C A A C G T A C G T C T G A T A G C G A T C A C G T G A C T

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:THAGGTATDGAGC-
----NTAATGAGCT
 A C G T G A C T C G T A A C T G A C T G A C G T C T G A C G A T C A G T A C T G C G T A C T A G G T A C A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T